BioImage Informatics

The BioImage Informatics Facility (BIIF) provides the support and training you need to perform state-of-the-art analyses on your image data. Our experts can help you deploy computational methods using computer vision, machine learning, and bioinformatics to analyze your images. Whether you are looking for training on how to use existing software solutions or help developing a custom workflow, we can help you get your analysis running.

Contact us in person, via the support form or write us an email. We usually respond fast and are always open to new ideas. You can visit us at one of our two locations: at the SciLifeLab Solna campus, or at the Centre for Image Analysis in Uppsala.

Services

Advice on best-practice and guidance on overall experimental design (staining, sample preparation, and image acquisition) for research involving microscopy imaging and quantitative data analysis.
Guidance on image analysis assay development, including image processing algorithm development and software engineering to address challenging project goals.
Advice on best-practice and guidance on high throughput/large-scale image processing using computing clusters, including data transfer and storage during the activity of the project.
Guidance on large-scale data analysis and visualization.

Here is a collection of ongoing and completed projects supported by the BioImage Informatics Facility.

We regularly send out a newsletter informing about upcoming events, workshops, seminar etc. – drop us an e-mail to be included or read our newsletter online.

Courses and Workshops

Part of our research support is provided in the form of courses, workshops and invited talks at courses related to digital image processing and analysis in life science.

Check here for upcoming courses and workshops.